Difference between revisions of "List of functions"
From SEED
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* '''[[Fungal ITS extraction|Fungal ITS extraction]] | * '''[[Fungal ITS extraction|Fungal ITS extraction]] | ||
* '''[[Clustering sequences|Clustering sequences]] | * '''[[Clustering sequences|Clustering sequences]] | ||
| + | * '''[[BLAST sequnces|BLAST sequnces]] | ||
===Titles processing=== | ===Titles processing=== | ||
Revision as of 19:54, 13 March 2015
Contents
General information
Data input
Sequence processing
- Remove sequences containing ambiguous bases
- De-replicate and Re-replicate sequences
- Save sequences
- Save as local database
- Aligning sequences
- Denoising sequnces from 454 pyrosequencing
- Clean chimeric sequences
- Fungal ITS extraction
- Clustering sequences
- BLAST sequnces
